This tool can be used to downsample specific regions. Each region can have it own fraction to downsample.
All other reads will not be touched.
For documentation and manuals visit our github.io page.
DownsampleRegions is part of BIOPET tool suite that is developed at LUMC by the SASC team. Each tool in the BIOPET tool suite is meant to offer a standalone function that can be used to perform a dedicate data analysis task or added as part of a pipeline, for example the SASC team's biowdl pipelines.